PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr032222.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 519aa    MW: 58712.6 Da    PI: 4.3847
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr032222.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.74.3e-31231493127
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                  pGf F Ptde l+ +yLk+k+eg++ ++ ++++e+d+ k+eP d+p    + +e+ew fF++ + k ++  r+ r t++g+ k tg ++e+ ++ +++
  Pbr032222.1  23 PGFGFCPTDELLIRYYLKNKIEGTDSHFRRIFPEIDLSKYEPGDIPaFVPEVNENEWVFFTRPKYKDTRCPRRDRLTHQGFYKITGDEREIRAEeSKA 120
                  9***************************999***************545566889*************************************985666 PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyr 127
                  ++g k +L+f++gr pk++++dWv+hey 
  Pbr032222.1 121 AIGKKIILTFHEGRGPKAKNSDWVIHEYY 149
                  79**************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-3518173IPR003441NAC domain
PROSITE profilePS5100538.50121173IPR003441NAC domain
PfamPF023651.3E-1423148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    Send to blast
MGSSSSITPE EGEAVRVNVS RLPGFGFCPT DELLIRYYLK NKIEGTDSHF RRIFPEIDLS  60
KYEPGDIPAF VPEVNENEWV FFTRPKYKDT RCPRRDRLTH QGFYKITGDE REIRAEESKA  120
AIGKKIILTF HEGRGPKAKN SDWVIHEYYC TKTEVGSKPT KQMDFVLCRL KNKSPSYKKP  180
KGDPTRGELP DSGANSEDDQ AAGGDVIPGP VEHLGYKERG DVNSSESPDG SCLIDCINIL  240
SFDDGDDETG DGKFPDLDDP AASARFLELR AEMEEILNSP PQTPHQTPQD YLSSTFLSSR  300
NIQLGAVLQA NGTSDDCNTI QSPFGDNNYS YTDKNDISTC DEGEPHSFTV SDFENKVVED  360
MSQELCVQPQ KDMDLLQLHV AQQSPTYTKL EDFMDANIFY DECIEWQPQI GDEYSHVNCK  420
DNISTNDENE PVSCNAFDLE NQYTDNMILE PCVQPEKYLR SVLHADICDN GYNNWQPTCW  480
DKDSYLTEKK NISTNDKDKQ YGSIAYNFDN QATNKRKR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B1e-201717913171NAC domain-containing protein 19
4dul_A1e-201717913171NAC domain-containing protein 19
1ut7_B1e-201717913171NO APICAL MERISTEM PROTEIN
1ut7_A1e-201717913171NO APICAL MERISTEM PROTEIN
1ut4_B1e-201717913171NO APICAL MERISTEM PROTEIN
1ut4_A1e-201717913171NO APICAL MERISTEM PROTEIN
3swp_D2e-201817917174NAC domain-containing protein 19
3swp_C2e-201817917174NAC domain-containing protein 19
3swp_B2e-201817917174NAC domain-containing protein 19
3swp_A2e-201817917174NAC domain-containing protein 19
3swm_D2e-201817917174NAC domain-containing protein 19
3swm_C2e-201817917174NAC domain-containing protein 19
3swm_B2e-201817917174NAC domain-containing protein 19
3swm_A2e-201817917174NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009340831.10.0PREDICTED: uncharacterized protein LOC103932903
TrEMBLM5X7M15e-75M5X7M1_PRUPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3806422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.27e-30TCV-interacting protein